PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000689991
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family NAC
Protein Properties Length: 474aa    MW: 54714.2 Da    PI: 6.9408
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000689991genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM60.17.3e-19782003128
            NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyat.gkrknr.atksgyWkatgkdkevls 94 
                     G+ F+P+d  lv++yL++k+ + +l + + i+++d+y  +P++L  k k+ + ++ wyfF++++ ++++ g+ ++  ++ +g W   g++ +vl+
  MDP0000689991  78 LGYTFNPEDGLLVCHYLREKCLDGDLLF-HSIEDADVYAKHPQNLIdKyKAVGARNVWYFFTRTRPNETQpGTSTSTeQVLAGKWI-FGNEMDVLH 171
                    69***********************888.77**************732233346679*****99887775455555445669***8.7999****9 PP

            NAM  95 kkgelvglkktLvfykgrapkgektdWvmheyrl 128
                     +ge+vg+k+ L + +g+a    kt+  + ey+l
  MDP0000689991 172 -QGEKVGVKQLLEYCDGDA----KTQYKIIEYKL 200
                    .999***********8776....56777777765 PP

2NAM39.22.1e-122904433128
            NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk................................kvkaeekewyfFskrdk 66 
                     G+ F+P d  l++++L++k+ ++ l +  +++e+d y  +P++L                                  ++ a  +  yfF++++ 
  MDP0000689991 290 LGYTFNPDDGILLHHHLREKCLENALGFYAILEEADXYAKHPQNLIGlflsefififsknwvplsvfgrltatdvtenyRALAAGNVGYFFTRSRP 385
                    69**************************999**************8457999****************9998876654422234455599999888 PP

            NAM  67 kyat.gkrknr.atksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                    + ++  + ++   +++g W   gk+ +vl+ +ge+vg+k+ L +       g kt   + eyrl
  MDP0000689991 386 NXTQpXTSTSTdHVQAGHWI-FGKELDVLH-QGEKVGVKQLLEYC----AAGAKTGYKIIEYRL 443
                    7765233333336789***8.8999****9.999**********9....567899999999997 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100518.80476229IPR003441NAC domain
SuperFamilySSF1019412.75E-2076204IPR003441NAC domain
PfamPF023654.7E-1179200IPR003441NAC domain
PROSITE profilePS5100513.601288463IPR003441NAC domain
SuperFamilySSF1019412.22E-5289346IPR003441NAC domain
PfamPF023652.0E-7291443IPR003441NAC domain
SuperFamilySSF1019411.31E-7374462IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 474 aa     Download sequence    Send to blast
MVQRKSSRLQ SVKEQEKLET DPIELRRKQL ILDIREANRI GDQNEEKRRI RLIHETEMVN  60
KLSKAXKXRD LQVQLISLGY TFNPEDGLLV CHYLREKCLD GDLLFHSIED ADVYAKHPQN  120
LIDKYKAVGA RNVWYFFTRT RPNETQPGTS TSTEQVLAGK WIFGNEMDVL HQGEKVGVKQ  180
LLEYCDGDAK TQYKIIEYKL DPLPDNLKDE EILGTNKLEL RKLKRIREXE ESLKXSXRXX  240
EEXERQELER LACVSSSFAA CRLEIXAAEI FRKQXEALKK RELEKRLISL GYTFNPDDGI  300
LLHHHLREKC LENALGFYAI LEEADXYAKH PQNLIGLFLS EFIFIFSKNW VPLSVFGRLT  360
ATDVTENYRA LAAGNVGYFF TRSRPNXTQP XTSTSTDHVQ AGHWIFGKEL DVLHQGEKVG  420
VKQLLEYCAA GAKTGYKIIE YRLDPCPDNL KDGPWFLCKL YKDGSYMEVQ SSL*
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Mdo.217380.0stem
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008371998.11e-147PREDICTED: protein CUP-SHAPED COTYLEDON 2-like
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G07680.28e-10NAC domain containing protein 80